(1) The distribution of organisms that inhabit patchy systems is dictated by their ability to move between patches, and the suitability of environmental conditions at patches to which they disperse. Understanding whether the species involved are identical to one another in their environmental requirements and their responses to variance in their environment is essential to understanding ecological processes in these systems, and to the management of species whose patchy and limited distributions present conservation risks. (2) Artesian springs in Australia’s arid interior are “islands” of hospitable wetland in uninhabitable “oceans” of dry land and are home to diverse and threatened assemblages of endemic species with severely restricted distributions. Many have strict environmental requirements, but the role of environmental heterogeneity amongst springs has rarely been considered alongside conventional patch characteristics (isolation and patch geometry). (3) We quantified environmental heterogeneity across springs, and the relationship between spring size, isolation (distances to neighbours) and environmental quality (depth, water chemistry), and patterns of occupancy and population persistence of six endemic spring snail species, all from different families, and with all restricted to a single <8000 ha system of springs in Australia. To do so, a survey was conducted for comparison against survey results of almost a decade before, and environmental variables of the springs were measured. Many of the snail species occupied few sites, and environmental variables strongly covaried, so an ordination-based approach was adopted to assess the relationship between environmental measures and the distribution of each species, and also whether springs that held a higher diversity of snails had specific characteristics. (4) Each snail species occupied a subset of springs (between 5% and 36% of the 85 sampled) and was associated with a particular set of conditions. Of the six species considered in further detail, most were restricted to the few springs that were large and deep. Species in family Tateidae were distinct in having colonised highly isolated springs (with >300 m to nearest neighbour). Springs with highest diversity were significantly larger, deeper and had more numerous neighbours within 300 m than those devoid of endemic snails, or those with low diversity. (5) Although spring size and isolation affect patterns of occupancy, the six snail species had significantly different environmental requirements from one another and these correlated with the distribution pattern of each. Approaches that ignore the role of environmental quality—and particularly depth in springs—are overlooking important processes outside of patch geometry that influence diversity. These organisms are highly susceptible to extinction, as most occupy less than 3 ha of habitat spread across few springs, and habitat degradation continues to compromise what little wetland area is needed for their persistence. Full article

The Colorado River basin (CRB), the primary water source for southwestern North America, is divided into the 283,384 km², water-exporting Upper CRB (UCRB) in the Colorado Plateau geologic province, and the 344,440 km², water-receiving Lower CRB (LCRB) in the Basin and Range geologic province. Long-regarded as a snowmelt-fed river system, approximately half of the river’s baseflow is derived from groundwater, much of it through springs. CRB springs are important for biota, culture, and the economy, but are highly threatened by a wide array of anthropogenic factors. We used existing literature, available databases, and field data to synthesize information on the distribution, ecohydrology, biodiversity, status, and potential socio-economic impacts of 20,872 reported CRB springs in relation to permanent stream distribution, human population growth, and climate change. CRB springs are patchily distributed, with highest density in montane and cliff-dominated landscapes. Mapping data quality is highly variable and many springs remain undocumented. Most CRB springs-influenced habitats are small, with a highly variable mean area of 2200 m², generating an estimated total springs habitat area of 45.4 km² (0.007% of the total CRB land area). Median discharge also is generally low and variable (0.10 L/s, N = 1687, 95% CI = 0.04 L/s), but ranges up to 1800 L/s. Water pH and conductivity is negatively related to elevation, with a stronger negative relationship in the UCRB compared to the LCRB. Natural springs water temperature and geochemistry throughout the CRB varies greatly among springs, but relatively little within springs, and depends on aquifer hydrogeology, elevation, and residence time. As the only state nearly entirely included within the CRB, Arizona is about equally divided between the two geologic provinces. Arizona springs produce approximately 0.6 km³/year of water. Data on >330 CRB springs-dependent taxa (SDT) revealed at least 62 plant species; 216 aquatic and riparian Mollusca, Hemiptera, Coleoptera, and other invertebrate taxa; several herpetofanual species; and two-thirds of 35 CRB fish taxa. Springs vegetation structure, composition, and diversity vary strongly by springs type, and plant species density within springs is high in comparison with upland habitats. Plant species richness and density is negatively related to elevation below 2500 m. Human population in and adjacent to the CRB are growing rapidly, and ecological impairment of springs exceeds 70% in many landscapes, particularly in urbanized and rangeland areas. Anthropogenic stressors are primarily related to groundwater depletion and pollution, livestock management, flow abstraction, non-native species introduction, and recreation. Ensuring the ecological integrity and sustainability of CRB groundwater supplies and springs will require more thorough basic inventory, assessment, research, information management, and local ecosystem rehabilitation, as well as improved groundwater and springs conservation policy. Full article

Reptiles are rarely included in urban freshwater biodiversity monitoring and conservation. We explored the global persistence of freshwater dependent turtles, lizards, crocodilians and snakes in cities with a population greater than 100,000 using species occurrence data in online databases from a five-year period (2013–2018). We then used ecological niche models to help identify the locations of suitable habitats for three freshwater reptile species in Sydney, Australia. Our Global analysis showed that sightings of a majority of known species of crocodilians and freshwater turtles were recorded in databases within this 5-year period in contrast to about one in three freshwater lizard species and one in ten freshwater snake species and that freshwater reptiles were observed within 50 km of the center of 40% of the 3525 cities. While global databases hold substantial recent species occurrence records for some regions, they contain very little data for large parts of the world. Modelling showed that potential suitable habitat for the three freshwater species in Sydney was distributed across areas with different levels of urban development. The persistence of populations of freshwater reptiles in and around a large proportion of the world’s cities show that this group can play an important role in urban biodiversity conservation. Full article

Understanding the drivers of species richness gradients is a central challenge of ecological and biodiversity research in freshwater science. Species richness along elevational gradients reveals a great variety of patterns. Here, we investigate elevational changes in species richness and turnover between microhabitats in near-natural spring habitats across Switzerland. Species richness was determined for 175 subsamples from 71 near-natural springs, and Poisson regression was applied between species richness and environmental predictors. Compositional turnover was calculated between the different microhabitats within single springs using the Jaccard index based on observed species and the Chao index based on estimated species numbers. In total, 539 diatom species were identified. Species richness increased monotonically with elevation. Habitat diversity and elevation explaining some of the species richness per site. The Jaccard index for the measured compositional turnover showed a mean similarity of 70% between microhabitats within springs, whereas the Chao index which accounts for sampling artefacts estimated a turnover of only 37%. Thus, the commonly applied method of counting 500 valves led to an undersampling of the rare species and might need to be reconsidered when assessing diatom biodiversity. Full article

High altitude glacier-fed streams are harsh environments inhabiting specialized invertebrate communities. Most research on biotic aspects in glacier-fed streams have focused on the simple relationship between presence/absence of species and prevailing environmental conditions, whereas functional strategies and potentials of glacial stream specialists have been hardly investigated so far. Using new and recent datasets from our investigations in the European Alps, we now demonstrate distinct functional properties of invertebrates that typically dominate glacier-fed streams and show significant relationships with declining glacier cover in alpine stream catchments. In particular, we present and argue about cause-effect relationships between glacier cover in the catchment and temperature, community structure, diversity, feeding strategies, early life development, body mass, and growth of invertebrates. By concentrating on key taxa in glacial and non-glacial alpine streams, the relevance of distinct adaptations in these functional components becomes evident. This clearly demonstrates that further studies of functional characteristics are essential for the understanding of peculiar diversity patterns, successful traits and their plasticity, evolutionary triggered species adaptions, and flexibilities. Full article

In 2015 an intense rainfall event hit the Valleys of the Trebbia, Nure, and Aveto watercourses in the Northern Apennines. In about 6 h a mesoscale convective system deployed a stunning amount of precipitation of 340 mm, with an extreme hourly rainfall intensity of >100 mm/h. It triggered debris flows along slopes and stream channels, landslides and floods, which caused serious damages. Through the optimal combination of rainfall data and radar volumes, in this work we present a detailed rainfall analysis, which will serve as a basis to create a quantitative correlation with debris flows over elementary hydrological units. We aim at providing an objective basis for future predictions, starting from the recognition of the forcing meteorological events, and then arriving at the prediction of triggering phenomena and to the debris-flow type. We further provide seven observations/case studies on the effects of extreme-precipitation events on freshwater environments in small mountain catchments. Extreme-precipitation events are becoming more frequent and widespread globally but their ecological effects are still insufficiently understood. In general, the effects of extreme events on inland-waters’ ecosystems are highly context-dependent, ranging from deleterious to beneficial. We therefore highlight the necessity of further studies to characterize these effects in more depth to be able to include appropriate mitigation measures in environmental planning and stewardship. Full article

Karst ecosystems are considered as priority environments for the protection of biodiversity on a global scale. This study provides a first comparative analysis of epilithic diatom flora from karst springs in two Mediterranean geographic areas (Spain and Italy) with contrasting characteristics (islands vs mainland). We investigated twenty-three springs with different anthropogenic impact levels once in the winter season between 2007 and 2017 (N = 23). A total of 176 diatom taxa (56 genera) were found of which 101 (44 genera) were observed in single sites. A general good biotic integrity was revealed by structural indices (species richness, diversity and evenness). However, crenophilous species were generally present and abundant in less impacted springs. Comparing islands and mainland, significant differences were found in species composition and diversity (H’) based on multivariate analyses (global R = 0.610; p = 0.001) and t-test (t = 2.304; p = 0.031). Discharge and Cl⁻ were the most significant variables in determining diatom assemblages. Our results confirm the role of springs as multiple ecotones and refuges for rare species and suggest that the geographic insularity may be an important factor in maintaining diatom biodiversity. Full article

The influence of selected factors on the diversity and composition of tychoplanktonic diatom community in limnocrene spring Zelenci was investigated. The spring that was studied is located in a glacial valley in the south-eastern calcareous Alps. Samples of tychoplankton were collected with a plankton net between October 2012 and August 2015 and for each sample, selected abiotic factors were measured. Over 100 different diatom species were identified, the most abundant being Achnanthidium minutissimum and Denticula tenuis. The most species-rich genera were Navicula, Fragilaria, Nitzschia, Cymbella and Gomphonema. The most significant impact on species composition of tychoplanktonic diatom community was from the conductivity of the water and the consecutive number of the month. Diversity was correlated negatively with concentration of orthophosphate and positively with pH and water level. Benthic species from the low profile ecological group dominated the tychoplankton community, with a share of 30–72%. High profile and motile species characteristic for benthos reached higher shares on average than euplanktonic species. This indicates the essential role of underwater springs in the maintenance of a species-rich tychoplanktonic community. Full article

Habitat alteration is one of the major drivers of species loss. Springs may be among the least affected aquatic habitats and are considered to be refugial habitats. Diatom assemblages were sampled from 74 Swiss springs comprising seven spring types over a wide altitudinal and ecological range as well as a wide range of anthropogenic modifications (alterations). Each spring was assigned to a five-point alteration scale, from natural to heavily altered. In total, 504 diatom species were recorded (not including 36 taxa that could not be identified to species level) from five microhabitats, and coded according to rarity and Red List status. The results of this extensive spring-habitat diatom survey were compared statistically with a large stream diatom dataset (DI-CH). The spring diatom microflora was more species rich and included more rare and/or threatened species than the stream microflora. The proportion of Red List species and rare species was highest in the DI-CH dataset, but the proportion of species with no Red List status and rare species was the highest in springs. Species richness, Red List status, and rarity were significantly related to the degree of spring alteration. This is consistent with the hypothesis that unaltered springs function as refuges for the Swiss fresh water microflora, and that they can be regarded as “least-impaired habitats”. These may be critically important for the conservation of the European freshwater diatom microflora. Full article

In this overview (introductory article to a special issue including 14 papers), we consider all main types of natural and artificial inland freshwater habitas (fwh). For each type, we identify the main biodiversity patterns and ecological features, human impacts on the system and environmental issues, and discuss ways to use this information to improve stewardship. Examples of selected key biodiversity/ecological features (habitat type): narrow endemics, sensitive (groundwater and GDEs); crenobionts, LIHRes (springs); unidirectional flow, nutrient spiraling (streams); naturally turbid, floodplains, large-bodied species (large rivers); depth-variation in benthic communities (lakes); endemism and diversity (ancient lakes); threatened, sensitive species (oxbow lakes, SWE); diverse, reduced littoral (reservoirs); cold-adapted species (Boreal and Arctic fwh); endemism, depauperate (Antarctic fwh); flood pulse, intermittent wetlands, biggest river basins (tropical fwh); variable hydrologic regime—periods of drying, flash floods (arid-climate fwh). Selected impacts: eutrophication and other pollution, hydrologic modifications, overexploitation, habitat destruction, invasive species, salinization. Climate change is a threat multiplier, and it is important to quantify resistance, resilience, and recovery to assess the strategic role of the different types of freshwater ecosystems and their value for biodiversity conservation. Effective conservation solutions are dependent on an understanding of connectivity between different freshwater ecosystems (including related terrestrial, coastal and marine systems). Full article

The United Republic of Tanzania (Tanzania) is rich in freshwater resources and biodiversity. In this article, we highlight the importance of Tanzanian rivers and make a case for the conservation of the freshwater and terrestrial species that rely on these rivers. We provide an overview of current knowledge on Tanzanian rivers and discuss progress towards implementation of the National Water Policy (2002) and Water Management Act (2009), two legislative instruments that have motivated environmental flow assessments on at least six major rivers and offer legal backing for river conservation. We examine major challenges that pose significant threats to water security for river ecosystems and humans in Tanzania, among those: (1) human population growth, (2) agricultural expansion, (3) river flow alterations, (4) industrialization, (5) introduced species, and (6) climate change. We conclude by offering recommendations for future river conservation efforts in Tanzania. Full article

A small standing-water ecosystem (SWE) is a shallow (<20 m) lentic water body with a surface of a few hectares (≤10 ha). Compared to larger counterparts, they exhibit wider ecotones, sometimes even equaling their whole surface, which maximizes structural heterogeneity, supporting exceptionally high biodiversity, metabolic rates, and functionality. Surprisingly, no binding regulations support global strategies for SWE conservation. This work consists of a literature review performed for the period 2004–2018 to assess the ecological and conservation value of SWEs and the contribution of the Water Framework Directive (WFD) in promoting their conservation. Outcomes from this work open new perspectives on SWEs, which emerge as valuable ecosystems, and confirm their pivotal contribution to watershed biodiversity, resilience, and functionality. Results also suggest clear narrative trends and large knowledge gaps across geographical areas, biological components, and target issues. Additionally, we note that SWEs are under-represented in the frame of WFD implementation, stressing their marginality into assessing procedures. All of this calls for further studies, especially outside Europe and with a global, multi-taxon perspective. These should be devoted to quantitatively assess the roles of SWEs in maintaining global water ecosystem quality, biodiversity, and services, and to prioritize management actions for their conservation. Full article

Headwaters, the sources of all stream networks, provide habitats that are unique from other freshwater environments and are used by a specialised subset of aquatic species. The features of headwaters that provide special habitats include predator-free or competitor-free spaces; specific resources (particularly detrital based); and moderate variations in flows, temperature and discharge. Headwaters provide key habitats for all or some life stages for a large number of species across just about all freshwater phyla and divisions. Some features of headwaters, including isolation and small population sizes, have allowed for the evolutionary radiation of many groups of organisms within and beyond those habitats. As small and easily engineered physical spaces, headwaters are easily degraded by streambank development, ditching and even burial. Headwater streams are among the most sensitive of freshwater ecosystems due to their intimate linkage with their catchments and how easily they are impacted. As a unique ecosystem with many specialist species, headwater streams deserve better stewardship. Full article

Foundation species provide habitat to other organisms and enhance ecosystem functions, such as nutrient cycling, carbon storage and sequestration, and erosion control. We focus on freshwater wetlands because these ecosystems are often characterized by foundation species; eutrophication and other environmental changes may cause the loss of some of these species, thus severely damaging wetland ecosystems. To better understand how wetland primary producer foundation species support other species and ecosystem functions across environmental gradients, we reviewed ~150 studies in subtropical, boreal, and temperate freshwater wetlands. We look at how the relative dominance of conspicuous and well-documented species (i.e., sawgrass, benthic diatoms and cyanobacteria, Sphagnum mosses, and bald cypress) and the foundational roles they play interact with hydrology, nutrient availability, and exposure to fire and salinity in representative wetlands. Based on the evidence analyzed, we argue that the foundation species concept should be more broadly applied to include organisms that regulate ecosystems at different spatial scales, notably the microscopic benthic algae that critically support associated communities and mediate freshwater wetlands’ ecosystem functioning. We give recommendations on how further research efforts can be prioritized to best inform the conservation of foundation species and of the freshwater wetlands they support. Full article